BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024H09SP1|AL428297
(810 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1518 1583 0.0
>3x_Contig1518
Length = 11021
Score = 1583 bits (797), Expect = 0.0
Identities = 801/803 (99%)
Strand = Plus / Minus
Query: 1 atgactccgatccagtggtagaaacgctagacgtattagaaatagagatagggtatttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3970 atgactccgatccagtggtagaaacgctagacgtattagaaatagagatagggtatttgc 3911
Query: 61 tcaaatccctagcgagggacatatcaatatcaagcccatagttattcggcgtagatgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3910 tcaaatccctagcgagggacatatcaatatcaagcccatagttattcggcgtagatgaag 3851
Query: 121 atatttgtctgctcttggcagacactaggttattgtagttattattattagtcgtagtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3850 atatttgtctgctcttggcagacactaggttattgtagttattattattagtcgtagtag 3791
Query: 181 gtagagacctactatcatcgggatcattaggttcattaccggactcgtcactcaatgaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3790 gtagagacctactatcatcgggatcattaggttcattaccggactcgtcactcaatgaca 3731
Query: 241 agccttgttgctgctgagagccaccagagtttttgatcgtaccttgaatgccatattgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3730 agccttgttgctgctgagagccaccagagtttttgatcgtaccttgaatgccatattgat 3671
Query: 301 tcttagacgggctgtttcccatattctagccaaaatctaatgtatattcaataaaaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3670 tcttagacgggctgtttcccatattctagccaaaatctaatgtatattcaataaaaaaat 3611
Query: 361 gtgaccaagaaaaaattaccaaaccaaaccaagatccaacaactagatgaaaccaaacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3610 gtgaccaagaaaaaattaccaaaccaaaccaagatccaacaactagatgaaaccaaacta 3551
Query: 421 aaagtgtatgtgtgtgtaaatgtgtatgagagcacgagtgtatgtgttaacctgggttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3550 aaagtgtatgtgtgtgtaaatgtgtatgagagcacgagtgtatgtgttaacctgggttat 3491
Query: 481 taactaattaaatatcctctcctctaaaccaggtttcttctttgcactcaagaattctgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3490 taactaattaaatatcctctcctctaaaccaggtttcttctttgcactcaagaattctgg 3431
Query: 541 gagaattcaccaatttgtaattctcaaattcttaaattctttttcattatatatggkata 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3430 gagaattcaccaatttgtaattctcaaattcttaaattctttttcattatatatggtata 3371
Query: 601 tgcggacggcagaaaattttttttttccctccaaatggaattcaggactctagataatga 660
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3370 tgcggacggcagataattttttttttccctccaaatggaattcaggactctagataatga 3311
Query: 661 aattggaacgaaaggtacggccattacattacataagagagggattcgatagtcatattg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3310 aattggaacgaaaggtacggccattacattacataagagagggattcgatagtcatattg 3251
Query: 721 acgtttgtacgggtgtaggatatagggtataagtcattcattatgtaatggatatcgtag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3250 acgtttgtacgggtgtaggatatagggtataagtcattcattatgtaatggatatcgtag 3191
Query: 781 agtatattctaaagacaattatc 803
|||||||||||||||||||||||
Sbjct: 3190 agtatattctaaagacaattatc 3168
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8215
Number of Sequences: 1807
Number of extensions: 8215
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 810
length of database: 10,358,551
effective HSP length: 16
effective length of query: 794
effective length of database: 10,329,639
effective search space: 8201733366
effective search space used: 8201733366
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)